SIMONA (SImulation of MOlecular and NAnoscale systems)
SIMONA is freely available for educational use. Contact us if you would like to use it commercially.
To obtain the code or if you have further questions, please write to wolfgang.wenzel∂kit.edu.
You can find the preprocessor documentation here
Strunk T, Wolf, M. et al. SIMONA 1.0: an efficient and versatile framework for stochastic simulations of molecular and nanoscale systems. J Comput Chem 33, 2602–2613 (2012).